Miyakogusa Predicted Gene

Lj1g3v5034780.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KHV6_SOYBN 1306 65.4 75.6 (tr|I1KHV6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G61740.2 1033 53.6 67.3 | Symbols: SDG14, ATX3 | SET domain protein 14 | chr3:22851133-22856548 REVERSE LENGTH=982
Medicago Medtr7g117355.1 1377 70.6 79.5 | histone-lysine N-methyltransferase ATX3 | HC | chr7:48487877-48479850 | 20130731
Soybean Glyma07g06190.1 1308 67.0 77.5  
LJGI gnl|LJGI|TC75232 133 85.9 85.9 similar to UniRef100_UPI00015057FC Cluster: DNA binding; n=1; Arabidopsis thaliana|Rep: DNA binding - Arabidopsis thaliana, partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v5034780.1 length: 932 aa.
IPR000313 PWWP
method AccNumber shortName E-value location
HMMPfam PF00855 PWWP 2.4e-08 153-233
HMMSmart SM00293 domain 0.00098 154-223
ProfileScan PS50812 PWWP 10.383 156-225
IPR001214 SET domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF00856 SET 9.8e-23 801-906
HMMSmart SM00317 SET 2.4e-33 790-913
ProfileScan PS50280 SET 32.565 801-911
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 0.78 321-375
505-552
616-670
IPR003616 Post-SET domain
HMMSmart SM00508 Cysteine-rich 0.0041 916-932
ProfileScan PS50868 POST_SET 9.069 916-932
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 2.8e-09 469-552
314-383
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 5.7e-08 318-377
504-552
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 506-551
309-374
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 1.1e-06 322-376
ProfileScan PS50016 ZF_PHD_2 9.054 319-377
503-554
IPR025780 Histone-lysine N-methyltransferase ATX
ProfileScan PS51566 SAM_MT43_TRX_MLL 387.623 1-932
no_ID  
Gene3D G3DSA:2.170.270.10 no description 3.3e-47 784-931
Gene3D G3DSA:2.30.30.160 no description 1.5e-21 148-255
HMMPanther PTHR13793 PHD 2.9e-254 504-932
HMMPanther PTHR13793:SF5 TRITHORAX 2.9e-254 504-932
HMMPfam PF13831 PHD_2 5.2e-12 518-552
HMMPfam PF13832 zf-HC5HC2H_2 5.4e-29 559-669
Seg seg seg NA 245-255
superfamily SSF63748 Tudor/PWWP/MBT 1.6e-23 146-296
superfamily SSF82199 SET 3.8e-50 784-929
Wolf-PSORT
Lj1g3v5034780.1	nucl 11, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v5034780.1