| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7L436_MEDTR | 1116 | 77.4 | 84.5 | (tr|G7L436) Cyclic nucleotide-gated channel C OS=Medicago truncatula GN=MTR_7g117310 PE=4 SV=1 |
| TAIR_pep | AT5G53130.1 | 813 | 60.5 | 72.7 | | Symbols: CNGC1, ATCNGC1 | cyclic nucleotide gated channel 1 | chr5:21537830-21540490 REVERSE LENGTH=716 |
| Medicago | Medtr7g117310.3 | 1117 | 77.4 | 84.5 | | cyclic nucleotide-gated ion channel-like protein | HC | chr7:48463618-48467212 | 20130731 |
| Soybean | Glyma19g44430.1 | 1093 | 76.7 | 84.3 | |
| LJGI | gnl|LJGI|TC76617 | 634 | 99.1 | 99.1 | similar to UniRef100_A7QTV4 Cluster: Chromosome undetermined scaffold_171, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_171, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%) |
| Lj1g3v5034750.1 | length: 701 aa. | |||
| IPR000595 | Cyclic nucleotide-binding domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF00027 | cNMP_binding | 2.3e-06 | 513-608 |
| HMMSmart | SM00100 | Cyclic | 5.8e-11 | 492-623 |
| ProfileScan | PS50042 | CNMP_BINDING_3 | 11.825 | 492-576 |
| IPR005821 | Ion transport domain | |||
| Molecular Function | GO:0005216 | ion channel activity | ||
| Biological Process | GO:0006811 | ion transport | ||
| Cellular Component | GO:0016020 | membrane | ||
| Biological Process | GO:0055085 | transmembrane transport | ||
| HMMPfam | PF00520 | Ion_trans | 1.5e-15 | 141-409 |
| IPR014710 | RmlC-like jelly roll fold | |||
| Gene3D | G3DSA:2.60.120.10 | no description | 6.4e-26 | 490-608 |
| IPR018490 | Cyclic nucleotide-binding-like | |||
| superfamily | SSF51206 | cAMP-binding | 1.9e-35 | 417-613 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 645-666 |
| Gene3D | G3DSA:1.10.287.630 | no description | 1.3e-11 | 417-483 |
| Gene3D | G3DSA:1.10.287.70 | no description | 2.2e-18 | 353-414 |
| HMMPanther | PTHR10217 | VOLTAGE | 1.4e-264 | 86-658 |
| HMMPanther | PTHR10217:SF7 | CYCLIC | 1.4e-264 | 86-658 |
| Seg | seg | seg | NA | 199-212 228-242 388-397 |
| superfamily | SSF81324 | Voltage-gated | 1.3e-31 | 88-429 |
Lj1g3v5034750.1 plas 12, nucl 1, E.R. 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v5034750.1 |