Miyakogusa Predicted Gene

Lj1g3v5020940.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MIM1_SOYBN 1485 82.9 88.2 (tr|I1MIM1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G12280.2 1214 67.8 77.8 | Symbols: RBR1 | retinoblastoma-related 1 | chr3:3913671-3918433 REVERSE LENGTH=1012
Medicago Medtr8g040560.1 1477 80.0 86.9 | retinoblastoma-related protein | HC | chr8:15105699-15098148 | 20130731
Soybean Glyma15g36890.1 1485 82.9 88.2  
LJGI gnl|LJGI|TC82665 1897 99.9 99.9 similar to UniRef100_A9UL14 Cluster: Retinoblastoma-related protein; n=1; Medicago sativa|Rep: Retinoblastoma-related protein - Medicago sativa (Alfalfa), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v5020940.2 length: 901 aa.
IPR002719 Retinoblastoma-associated protein, B-box
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0051726 regulation of cell cycle    
HMMPfam PF01857 RB_B 4.2e-51 741-873
IPR002720 Retinoblastoma-associated protein, A-box
Cellular Component GO:0005634 nucleus    
Biological Process GO:0051726 regulation of cell cycle    
HMMPfam PF01858 RB_A 9.2e-72 417-618
IPR013763 Cyclin-like
Gene3D G3DSA:1.10.472.10 no description 9.3e-45 425-608
734-883
superfamily SSF47954 Cyclin-like 2.9e-49 424-622
740-884
IPR024599 Domain of unknown function DUF3452, retinoblastoma-associated
HMMPfam PF11934 DUF3452 2.3e-40 96-234
no_ID  
Coil coil coiled-coil NA 329-350
HMMPanther PTHR13742 RETINOBLASTOMA-ASSOCIATED 0 21-882
HMMPanther PTHR13742:SF1 RETINOBLASTOMA-RELATED 0 21-882
Seg seg seg NA 88-106
357-374
Wolf-PSORT
Lj1g3v5020940.2	nucl 6, cyto 3, cysk_nucl 3, chlo 1, mito 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v5020940.2