Miyakogusa Predicted Gene
- Lj1g3v5020860.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7L2Y6_MEDTR |
554 |
81.1 |
87.7 |
(tr|G7L2Y6) GDSL esterase/lipase OS=Medicago truncatula GN=MTR_7g116500 PE=4 SV=1 |
| TAIR_pep |
AT5G33370.1 |
495 |
71.9 |
85.0 |
| Symbols: | GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:12602773-12604670 REVERSE LENGTH=366 |
| Medicago |
Medtr7g116500.1 |
554 |
81.1 |
87.7 |
| GDSL-like lipase/acylhydrolase | HC | chr7:48074277-48078292 | 20130731 |
| Soybean |
Glyma19g43920.1 |
551 |
80.3 |
87.6 |
|
| LJGI |
gnl|LJGI|TC79343 |
918 |
99.8 |
99.8 |
similar to UniRef100_A7PZ15 Cluster: Chromosome chr4 scaffold_39, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr4 scaffold_39, whole genome shotgun sequence - Vitis vinifera (Grape), partial (73%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v5020860.1 |
length: 335 aa. |
| IPR001087 |
Lipase, GDSL |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006629 |
lipid metabolic process |
|
|
| Molecular Function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
|
|
| HMMPfam |
PF00657 |
Lipase_GDSL |
2.3e-23 |
35-335 |
| IPR013831 |
SGNH hydrolase-type esterase domain |
| Molecular Function |
GO:0016787 |
hydrolase activity |
|
|
| Gene3D |
G3DSA:3.40.50.1110 |
no description |
2.2e-85 |
22-335 |
| no_ID |
|
| HMMPanther |
PTHR22835 |
ZINC |
1e-116 |
11-335 |
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
5.000 |
1-16 |
| Seg |
seg |
seg |
NA |
252-265 |
- Wolf-PSORT
Lj1g3v5020860.1 extr 10, plas 2, chlo 1, mito 1, chlo_mito 1, nucl_plas 1, golg_plas 1, cysk_plas 1, E.R._plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v5020860.1 |
|