Miyakogusa Predicted Gene

Lj1g3v5020820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SAE2_LOTJA 488 100.0 100.0 (tr|I3SAE2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G71260.1 264 59.2 76.1 | Symbols: ATWHY2, WHY2 | WHIRLY 2 | chr1:26861849-26863391 REVERSE LENGTH=238
Medicago Medtr7g116270.1 357 75.3 83.0 | single-stranded DNA-binding protein WHY3 | HC | chr7:47941989-47938429 | 20130731
Soybean Glyma19g43880.1 326 70.5 77.9  
LJGI gnl|LJGI|TC74319 1378 99.4 99.4 similar to UniRef100_A7Q7T2 Cluster: Chromosome chr18 scaffold_61, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_61, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v5020820.1 length: 235 aa.
IPR009044 ssDNA-binding transcriptional regulator
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Gene3D G3DSA:2.30.31.10 no description 1.2e-74 45-211
superfamily SSF54447 ssDNA-binding 4.5e-65 48-235
IPR013742 Plant transcription factor
HMMPfam PF08536 Whirly 2.1e-60 57-192
no_ID  
HMMPanther PTHR31745 FAMILY 7.6e-88 40-235
Wolf-PSORT
Lj1g3v5020820.1	chlo 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v5020820.1