Miyakogusa Predicted Gene
- Lj1g3v5000610.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KGZ3_SOYBN |
1029 |
83.7 |
89.5 |
(tr|K7KGZ3) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G04490.1 |
741 |
64.2 |
77.9 |
| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38092.1); Has 75 Blast hits to 64 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 36; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | chr3:1200816-1209713 FORWARD LENGTH=1118 |
| Medicago |
Medtr7g115710.1 |
1022 |
83.8 |
89.8 |
| exportin-4 protein, putative | HC | chr7:47861948-47841908 | 20130731 |
| Soybean |
Glyma19g43770.1 |
837 |
71.3 |
77.3 |
|
| LJGI |
gnl|LJGI|BP055040 |
1021 |
99.6 |
99.6 |
similar to UniRef100_A7QMV8 Cluster: Chromosome chr14 scaffold_128, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_128, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v5000610.1 |
length: 600 aa. |
| IPR016024 |
Armadillo-type fold |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
2.8e-06 |
37-241 |
| no_ID |
|
| HMMPanther |
PTHR12596 |
EXPORTIN |
6.6e-196 |
10-599 |
| HMMPanther |
PTHR12596:SF1 |
GB |
6.6e-196 |
10-599 |
| Seg |
seg |
seg |
NA |
71-82 |
- Wolf-PSORT
Lj1g3v5000610.1 cyto 7, chlo 2, nucl 2, plas 1, extr 1, vacu 1, chlo_mito 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v5000610.1 |
|