Miyakogusa Predicted Gene

Lj1g3v4998490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JRR9_SOYBN 607 79.9 87.6 (tr|I1JRR9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G04460.1 556 67.9 82.3 | Symbols: PEX12, ATPEX12, APM4 | peroxin-12 | chr3:1186641-1189094 FORWARD LENGTH=393
Medicago Medtr1g116380.1 563 73.1 83.1 | peroxisome biogenesis protein | HC | chr1:52625807-52621881 | 20130731
Soybean Glyma03g41050.1 607 79.9 87.6  
LJGI gnl|LJGI|TC69758 2254 100.0 100.0 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined scaffold_62, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_62, whole genome shotgun sequence - Vitis vinifera (Grape), partial (87%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4998490.1 length: 379 aa.
IPR006845 Pex, N-terminal
method AccNumber shortName E-value location
HMMPfam PF04757 Pex2_Pex12 2.9e-52 21-297
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.8e-05 330-371
IPR017375 Peroxisome assembly protein 12
Cellular Component GO:0005779 integral to peroxisomal membrane    
Biological Process GO:0006625 protein targeting to peroxisome    
Molecular Function GO:0008022 protein C-terminus binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPIR PIRSF038074 Peroxisome 6.1e-188 1-379
HMMPanther PTHR12888 PEROXISOME 6.5e-116 1-379
no_ID  
HMMPanther PTHR12888:SF0 SUBFAMILY 6.5e-116 1-379
HMMPfam PF13923 zf-C3HC4_2 7.5e-07 330-370
Seg seg seg NA 97-103
309-317
superfamily SSF57850 RING/U-box 1.1e-09 331-379
Wolf-PSORT
Lj1g3v4998490.1	chlo 6, nucl 3, plas 2, cyto_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4998490.1