Miyakogusa Predicted Gene

Lj1g3v4997240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NCB1_SOYBN 636 81.5 85.0 (tr|I1NCB1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G04610.1 501 65.0 75.5 | Symbols: FLK | RNA-binding KH domain-containing protein | chr3:1250762-1254272 REVERSE LENGTH=577
Medicago Medtr7g115340.1 615 73.6 78.4 | poly(rC)-binding-like protein | HC | chr7:47649189-47656173 | 20130731
Soybean Glyma19g43540.1 636 81.5 85.0  
LJGI gnl|LJGI|TC59955 1739 100.0 100.0 similar to UniRef100_A7QMQ0 Cluster: Chromosome undetermined scaffold_127, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_127, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4997240.1 length: 455 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 7.7e-09 54-134
146-221
330-400
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 2.5e-11 58-108
150-216
333-395
ProfileScan PS50084 KH_TYPE_1 14.739 55-122
147-216
331-395
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 1.5e-15 49-109
147-222
330-403
HMMPanther PTHR10288 KH 3.1e-98 23-449
HMMPanther PTHR10288:SF53 KH 3.1e-98 23-449
Seg seg seg NA 24-39
255-281
402-413
440-455
superfamily SSF54791 Eukaryotic 8.8e-15 134-240
318-401
42-110
Wolf-PSORT
Lj1g3v4997240.1	cyto 8, cysk 3, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4997240.1