database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1JRL0_SOYBN | 1194 | 83.8 | 87.7 | (tr|I1JRL0) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
TAIR_pep | AT1G54490.1 | 1030 | 72.3 | 80.7 | | Symbols: AIN1, EIN5, XRN4, ATXRN4 | exoribonuclease 4 | chr1:20350300-20356650 FORWARD LENGTH=947 |
Medicago | Medtr7g114570.1 | 1142 | 80.8 | 87.0 | | 5'-3' exoribonuclease | HC | chr7:47305879-47315956 | 20130731 |
Soybean | Glyma03g40500.1 | 1190 | 83.7 | 87.6 | |
LJGI | gnl|LJGI|TC63057 | 1211 | 99.8 | 99.8 | similar to UniRef100_A7Q5V8 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%) |
Lj1g3v4957670.1 | length: 688 aa. | |||
IPR001878 | Zinc finger, CCHC-type | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0008270 | zinc ion binding | ||
Gene3D | G3DSA:4.10.60.10 | no description | 0.00018 | 466-467 |
HMMPfam | PF00098 | zf-CCHC | 7.1e-05 | 262-277 |
HMMSmart | SM00343 | zinc | 0.0013 | 262-278 |
ProfileScan | PS50158 | ZF_CCHC | 10.213 | 262-277 |
IPR004859 | Putative 5-3 exonuclease | |||
Molecular Function | GO:0003676 | nucleic acid binding | ||
Molecular Function | GO:0004527 | exonuclease activity | ||
Cellular Component | GO:0005622 | intracellular | ||
HMMPfam | PF03159 | XRN_N | 2.9e-106 | 1-253 |
IPR017151 | 5'-3' exoribonuclease 2 | |||
Molecular Function | GO:0004534 | 5'-3' exoribonuclease activity | ||
Cellular Component | GO:0005634 | nucleus | ||
Biological Process | GO:0006139 | nucleobase-containing compound metabolic process | ||
HMMPIR | PIRSF037239 | 5'-3' | 0 | 1-688 |
IPR027073 | 5'-3' exoribonuclease | |||
HMMPanther | PTHR12341 | 5'->3' | 0 | 2-688 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 117-145 |
Seg | seg | seg | NA | 116-137 414-433 |
Lj1g3v4957670.1 cyto 14
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj1g3v4957670.1 |