Miyakogusa Predicted Gene

Lj1g3v4955430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N019_SOYBN 675 67.5 72.5 (tr|K7N019) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G26932.2 264 65.6 79.6 | Symbols: DRB3 | dsRNA-binding protein 3 | chr3:9930460-9931714 REVERSE LENGTH=359
Medicago Medtr7g114310.1 581 65.2 70.6 | double-stranded RNA-binding motif protein | HC | chr7:47187253-47183014 | 20130731
Soybean Glyma19g42970.1 647 65.9 70.7  
LJGI gnl|LJGI|GO010826 924 100.0 100.0 homologue to UniRef100_A7Q5S5 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4955430.1 length: 528 aa.
IPR001159 Double-stranded RNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003725 double-stranded RNA binding    
HMMPfam PF00035 dsrm 1.9e-14 2-66
88-153
HMMSmart SM00358 Double-stranded 4.1e-18 2-69
88-154
ProfileScan PS50137 DS_RBD 11.189 1-70
87-155
IPR014720 Double-stranded RNA-binding-like domain
Gene3D G3DSA:3.30.160.20 no description 1.8e-17 2-67
88-154
no_ID  
HMMPanther PTHR32503 FAMILY 2.4e-133 2-263
HMMPanther PTHR32503:SF0 SUBFAMILY 2.4e-133 2-263
Seg seg seg NA 138-152
236-247
255-265
501-517
superfamily SSF54768 dsRNA-binding 2.2e-17 88-179
2-68
Wolf-PSORT
Lj1g3v4955430.1	nucl 11, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4955430.1