Miyakogusa Predicted Gene
- Lj1g3v4931740.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T6N8_LOTJA |
187 |
86.1 |
88.0 |
(tr|I3T6N8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G27490.1 |
172 |
81.4 |
89.2 |
| Symbols: | Integral membrane Yip1 family protein | chr5:9703130-9704653 REVERSE LENGTH=282 |
| Medicago |
Medtr7g113620.1 |
176 |
78.7 |
88.0 |
| integral membrane Yip1-family protein | HC | chr7:46824162-46828047 | 20130731 |
| Soybean |
Glyma03g39850.1 |
180 |
81.5 |
87.0 |
|
| LJGI |
gnl|LJGI|FS358989 |
642 |
100.0 |
100.0 |
similar to UniRef100_Q6NPD4 Cluster: At5g27490; n=1; Arabidopsis thaliana|Rep: At5g27490 - Arabidopsis thaliana (Mouse-ear cress), partial (56%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4931740.1 |
length: 126 aa. |
| IPR006977 |
Yip1 domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF04893 |
Yip1 |
2.3e-10 |
16-120 |
| no_ID |
|
| HMMPanther |
PTHR12822 |
UNCHARACTERIZED |
4.3e-37 |
12-109 |
- Wolf-PSORT
Lj1g3v4931740.1 chlo 5, nucl 3, cyto 2, extr 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4931740.1 |
|