Miyakogusa Predicted Gene

Lj1g3v4921060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL A2Q336_MEDTR 650 77.3 84.2 (tr|A2Q336) Peptidase S1 and S6, chymotrypsin/Hap OS=Medicago truncatula GN=MTR_7g113170 PE=4 SV=1
TAIR_pep AT5G27660.1 481 60.9 75.2 | Symbols: | Trypsin family protein with PDZ domain | chr5:9789835-9792235 REVERSE LENGTH=428
Medicago Medtr7g113170.1 650 77.3 84.2 | trypsin-like serine protease | HC | chr7:46585203-46590419 | 20130731
Soybean Glyma19g42250.1 621 72.7 82.9  
LJGI gnl|LJGI|TC60595 1364 97.2 97.2 similar to UniRef100_A2Q336 Cluster: Peptidase S1 and S6, chymotrypsin/Hap; n=1; Medicago truncatula|Rep: Peptidase S1 and S6, chymotrypsin/Hap - Medicago truncatula (Barrel medic), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4921060.1 length: 430 aa.
IPR001478 PDZ domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF13180 PDZ_2 2.6e-08 337-398
HMMSmart SM00228 Domain 4.3e-07 326-413
ProfileScan PS50106 PDZ 9.511 313-402
superfamily SSF50156 PDZ 8.6e-21 325-427
IPR001940 Peptidase S1C
Molecular Function GO:0004252 serine-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
FPrintScan PR00834 PROTEASES2C 1.7e-28 153-165
223-247
261-278
283-300
372-384
IPR009003 Trypsin-like cysteine/serine peptidase domain
Molecular Function GO:0003824 catalytic activity    
superfamily SSF50494 Trypsin-like 4.8e-58 111-336
no_ID  
Gene3D G3DSA:2.30.42.10 no description 6.9e-17 328-426
Gene3D G3DSA:2.40.10.10 no description 5.6e-37 113-216
217-327
HMMPanther PTHR22939 SERINE 1.4e-124 111-429
HMMPanther PTHR22939:SF12 SERINE 1.4e-124 111-429
HMMPfam PF13365 Trypsin_2 7.5e-21 144-290
Wolf-PSORT
Lj1g3v4921060.1	chlo 10, mito 2, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4921060.1