Miyakogusa Predicted Gene
- Lj1g3v4918600.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KXH7_MEDTR |
968 |
86.5 |
93.7 |
(tr|G7KXH7) Pectinesterase OS=Medicago truncatula GN=MTR_7g112580 PE=3 SV=1 |
| TAIR_pep |
AT3G05620.1 |
701 |
63.3 |
76.2 |
| Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr3:1629658-1631766 REVERSE LENGTH=543 |
| Medicago |
Medtr7g112580.1 |
968 |
86.5 |
93.7 |
| pectinesterase/pectinesterase inhibitor | HC | chr7:46310828-46313070 | 20130731 |
| Soybean |
Glyma19g41950.1 |
957 |
88.0 |
94.7 |
|
| LJGI |
gnl|LJGI|TC71544 |
87.7 |
86.5 |
86.5 |
similar to UniRef100_Q43111 Cluster: Pectinesterase-3 precursor; n=1; Phaseolus vulgaris|Rep: Pectinesterase-3 precursor - Phaseolus vulgaris (Kidney bean) (French bean), partial (34%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4918600.2 |
length: 545 aa. |
| IPR000070 |
Pectinesterase, catalytic |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005618 |
cell wall |
|
|
| Molecular Function |
GO:0030599 |
pectinesterase activity |
|
|
| Biological Process |
GO:0042545 |
cell wall modification |
|
|
| HMMPfam |
PF01095 |
Pectinesterase |
9.6e-138 |
241-529 |
| IPR006501 |
Pectinesterase inhibitor |
| Molecular Function |
GO:0004857 |
enzyme inhibitor activity |
|
|
| Molecular Function |
GO:0030599 |
pectinesterase activity |
|
|
| Gene3D |
G3DSA:1.20.140.40 |
no description |
6.8e-26 |
37-194 |
| HMMPfam |
PF04043 |
PMEI |
7.3e-27 |
38-190 |
| HMMSmart |
SM00856 |
Plant |
4.6e-26 |
35-190 |
| HMMTigr |
TIGR01614 |
PME_inhib: |
4e-22 |
4-195 |
| superfamily |
SSF101148 |
Plant |
1.5e-21 |
37-197 |
| IPR011050 |
Pectin lyase fold/virulence factor |
| superfamily |
SSF51126 |
Pectin |
1.1e-109 |
234-543 |
| IPR012334 |
Pectin lyase fold |
| Gene3D |
G3DSA:2.160.20.10 |
no description |
3.8e-118 |
239-541 |
| IPR018040 |
Pectinesterase, active site |
| PatternScan |
PS00503 |
PECTINESTERASE_2 |
NA |
385-394 |
| no_ID |
|
| HMMPanther |
PTHR31707 |
FAMILY |
2.1e-243 |
1-545 |
| HMMPanther |
PTHR31707:SF0 |
SUBFAMILY |
2.1e-243 |
1-545 |
| Seg |
seg |
seg |
NA |
7-16 |
- Wolf-PSORT
Lj1g3v4918600.2 extr 5, chlo 3, cyto 2, E.R. 2, chlo_mito 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4918600.2 |
|