Miyakogusa Predicted Gene

Lj1g3v4918600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KGM0_SOYBN 860 78.9 85.0 (tr|K7KGM0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G27920.1 519 52.2 67.4 | Symbols: | F-box family protein | chr5:9942063-9944507 REVERSE LENGTH=642
Medicago Medtr7g112570.3 784 71.8 81.8 | F-box/LRR protein | HC | chr7:46304993-46309239 | 20130731
Soybean Glyma19g41930.1 857 78.6 84.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4918600.1 length: 560 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 0.011 62-87
93-118
144-169
170-195
196-220
221-245
246-271
323-348
349-374
375-400
401-426
427-451
452-477
478-503
504-528
529-554
no_ID  
Gene3D G3DSA:3.80.10.10 no description 7.5e-28 10-294
295-426
427-559
HMMPanther PTHR23125 F-BOX/LEUCINE 1.2e-146 3-541
HMMPanther PTHR23125:SF101SUBFAMILY NOT 1.2e-146 3-541
HMMPfam PF13516 LRR_6 0.049 62-83
452-475
478-501
Seg seg seg NA 191-202
364-374
401-412
superfamily SSF52047 RNI-like 4.2e-30 277-545
13-262
Wolf-PSORT
Lj1g3v4918600.1	nucl 5, chlo 4, cyto 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4918600.1