Miyakogusa Predicted Gene
- Lj1g3v4899040.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LBZ1_MEDTR |
812 |
85.0 |
90.9 |
(tr|G7LBZ1) Alpha-1 6-xylosyltransferase OS=Medicago truncatula GN=MTR_8g058450 PE=4 SV=1 |
| TAIR_pep |
AT4G02500.1 |
730 |
76.1 |
84.9 |
| Symbols: ATXT2, XXT2, XT2 | UDP-xylosyltransferase 2 | chr4:1101638-1103345 FORWARD LENGTH=461 |
| Medicago |
Medtr7g108675.1 |
823 |
85.2 |
91.0 |
| xyloglucan xylosyltransferase | HC | chr7:44269663-44267690 | 20130731 |
| Soybean |
Glyma19g39760.1 |
812 |
85.1 |
89.5 |
|
| LJGI |
gnl|LJGI|TC63782 |
281 |
83.7 |
83.7 |
homologue to UniRef100_Q5TIN3 Cluster: Alpha-1,6-xylosyltransferase; n=1; Gossypium raimondii|Rep: Alpha-1,6-xylosyltransferase - Gossypium raimondii (New World cotton), partial (35%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4899040.1 |
length: 451 aa. |
| IPR008630 |
Galactosyl transferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0016758 |
transferase activity, transferring hexosyl groups |
|
|
| HMMPfam |
PF05637 |
Glyco_transf_34 |
2.2e-73 |
139-378 |
| no_ID |
|
| HMMPanther |
PTHR31311 |
FAMILY |
6e-183 |
78-447 |
| Seg |
seg |
seg |
NA |
90-101 |
- Wolf-PSORT
Lj1g3v4899040.1 mito 4.5, chlo 3, cyto_mito 3, plas 2, vacu 2, E.R. 2, E.R._vacu 2, E.R._plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4899040.1 |
Not targeted |
-19.890 |
-2.308 |
-1.604 |
12.80% |
-15.978
|