database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | I1NB64_SOYBN | 306 | 79.7 | 83.4 | (tr|I1NB64) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep | AT1G02840.3 | 269 | 68.7 | 75.4 | | Symbols: SR1, ATSRP34, SRP34, SR34, At-SR34 | RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:626918-629583 FORWARD LENGTH=303 |
Medicago | Medtr8g058530.1 | 299 | 78.1 | 82.4 | | pre-mRNA-splicing factor SF2-like protein | HC | chr8:20148291-20144393 | 20130731 |
Soybean | Glyma19g39850.6 | 306 | 79.7 | 83.4 | |
LJGI | gnl|LJGI|TC58662 | 1409 | 100.0 | 100.0 | similar to UniRef100_A7Q0B9 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%) |
Lj1g3v4885920.1 | length: 315 aa. | |||
IPR000504 | RNA recognition motif domain | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Molecular Function | GO:0003676 | nucleic acid binding | ||
HMMPfam | PF00076 | RRM_1 | 2.3e-10 | 9-76 113-175 |
HMMSmart | SM00360 | RNA | 6.6e-07 | 8-78 112-185 |
ProfileScan | PS50102 | RRM | 9.388 | 7-82 111-189 |
IPR012677 | Nucleotide-binding, alpha-beta plait | |||
Molecular Function | GO:0000166 | nucleotide binding | ||
Gene3D | G3DSA:3.30.70.330 | no description | 2.5e-24 | 3-92 107-200 |
no_ID | ||||
HMMPanther | PTHR10548 | SPLICING | 3.3e-128 | 2-315 |
HMMPanther | PTHR10548:SF13 | SPLICING | 3.3e-128 | 2-315 |
Seg | seg | seg | NA | 82-109 188-269 277-315 |
superfamily | SSF54928 | RNA-binding | 1.4e-32 | 6-192 |
Lj1g3v4885920.1 nucl 12, mito 1, plas 1, mito_plas 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj1g3v4885920.1 |