Miyakogusa Predicted Gene

Lj1g3v4865380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JQP1_SOYBN 1151 87.7 91.2 (tr|I1JQP1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G40940.1 904 72.5 82.0 | Symbols: ERS1, ERS | ethylene response sensor 1 | chr2:17084635-17086819 REVERSE LENGTH=613
Medicago Medtr7g109150.1 1157 88.7 91.8 | ethylene receptor | HC | chr7:44564220-44559611 | 20130731
Soybean Glyma03g37470.1 1151 87.7 91.2  
LJGI gnl|LJGI|TC62898 1933 99.9 99.9 homologue to UniRef100_A4ZPP2 Cluster: Ethylene receptor; n=1; Glycine max|Rep: Ethylene receptor - Glycine max (Soybean), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4865380.1 length: 635 aa.
IPR003018 GAF domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF01590 GAF 3.5e-15 158-307
HMMSmart SM00065 Domain 1e-12 158-317
IPR003594 Histidine kinase-like ATPase, ATP-binding domain
Molecular Function GO:0005524 ATP binding    
Gene3D G3DSA:3.30.565.10 no description 7.7e-35 409-585
HMMPfam PF02518 HATPase_c 4.5e-26 455-585
HMMSmart SM00387 Histidine 9.1e-33 455-587
superfamily SSF55874 ATPase 7.5e-39 408-583
IPR003661 Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain
Molecular Function GO:0000155 phosphorelay sensor kinase activity    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMPfam PF00512 HisKA 7.2e-17 344-408
HMMSmart SM00388 His 1.3e-20 343-408
IPR004358 Signal transduction histidine kinase-related protein, C-terminal
Biological Process GO:0016310 phosphorylation    
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
FPrintScan PR00344 BCTRLSENSOR 2.2e-09 511-525
529-539
546-564
IPR005467 Signal transduction histidine kinase, core
ProfileScan PS50109 HIS_KIN 42.742 350-587
IPR009082 Signal transduction histidine kinase, homodimeric domain
Molecular Function GO:0004871 signal transducer activity    
Biological Process GO:0007165 signal transduction    
Gene3D G3DSA:1.10.287.130 no description 3e-09 336-404
superfamily SSF47384 Homodimeric 1.1e-17 325-410
no_ID  
Gene3D G3DSA:3.30.450.40 no description 1.2e-10 144-323
HMMPanther PTHR24423 TWO 1.1e-66 103-585
HMMPanther PTHR24423:SF360HYBRID SIGNAL 1.1e-66 103-585
Seg seg seg NA 292-307
361-375
superfamily SSF55781 GAF 5.5e-15 158-321
Wolf-PSORT
Lj1g3v4865380.1	cyto 8, E.R._vacu 3, vacu 2.5, E.R. 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4865380.1