Miyakogusa Predicted Gene

Lj1g3v4863130.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TBP9_SOYBN 509 77.8 84.0 (tr|C6TBP9) Uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT3G05710.2 407 63.8 74.8 | Symbols: SYP43, ATSYP43 | syntaxin of plants 43 | chr3:1685262-1687229 FORWARD LENGTH=331
Medicago Medtr7g109165.1 437 76.3 81.4 | syntaxin of plants protein | HC | chr7:44624523-44629883 | 20130731
Soybean Glyma19g40160.1 509 77.8 84.0  
LJGI gnl|LJGI|TC75655 722 99.5 99.5 similar to UniRef100_A7PRV6 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4863130.1 length: 324 aa.
IPR000727 Target SNARE coiled-coil domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF05739 SNARE 6.3e-18 233-295
HMMSmart SM00397 Helical 2.1e-16 223-290
ProfileScan PS50192 T_SNARE 17.599 228-290
IPR006011 Syntaxin, N-terminal
Cellular Component GO:0016020 membrane    
HMMPfam PF00804 Syntaxin 9.7e-11 74-172
HMMSmart SM00503 Syntaxin 4.5e-15 68-184
IPR006012 Syntaxin/epimorphin, conserved site
Molecular Function GO:0005484 SNAP receptor activity    
Biological Process GO:0006886 intracellular protein transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00914 SYNTAXIN NA 234-273
IPR010989 t-SNARE
Cellular Component GO:0016020 membrane    
Biological Process GO:0016192 vesicle-mediated transport    
superfamily SSF47661 t-snare 3.1e-38 71-283
no_ID  
Gene3D G3DSA:1.20.58.70 no description 4.3e-41 73-283
HMMPanther PTHR19957 SYNTAXIN 1.8e-149 4-323
HMMPanther PTHR19957:SF60 SUBFAMILY 1.8e-149 4-323
Seg seg seg NA 25-31
42-51
225-239
Wolf-PSORT
Lj1g3v4863130.1	chlo 6, mito 3, golg 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4863130.1