Miyakogusa Predicted Gene

Lj1g3v4862830.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NBC1_SOYBN 657 81.1 86.5 (tr|I1NBC1) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT4G02070.1 496 58.7 71.4 | Symbols: MSH6, MSH6-1, ATMSH6 | MUTS homolog 6 | chr4:906079-912930 FORWARD LENGTH=1324
Medicago Medtr7g109470.1 632 77.6 84.8 | DNA mismatch repair MSH3-like protein | HC | chr7:44767037-44759016 | 20130731
Soybean Glyma19g40350.1 657 81.1 86.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4862830.1 length: 468 aa.
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
HMMPfam PF01624 MutS_I 2.2e-34 179-291
IPR007860 DNA mismatch repair protein MutS, connector domain
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
Gene3D G3DSA:3.30.420.110 no description 6.1e-06 301-453
HMMPfam PF05188 MutS_II 4.1e-12 302-455
superfamily SSF53150 DNA 1e-08 286-453
IPR015536 DNA mismatch repair protein MutS-homologue MSH6
HMMPanther PTHR11361:SF31 MUTS 1.8e-127 50-468
IPR016151 DNA mismatch repair protein MutS, N-terminal
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006298 mismatch repair    
Molecular Function GO:0030983 mismatched DNA binding    
Gene3D G3DSA:3.40.1170.10 no description 9e-39 165-292
superfamily SSF55271 DNA 8.5e-36 163-287
no_ID  
Coil coil coiled-coil NA 34-55
HMMPanther PTHR11361 DNA 1.8e-127 50-468
Seg seg seg NA 14-30
36-60
308-317
439-451
Wolf-PSORT
Lj1g3v4862830.1	nucl 6.5, cyto_nucl 4.5, cysk 3, chlo 2, cysk_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4862830.1