Miyakogusa Predicted Gene
- Lj1g3v4851630.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KSU2_MEDTR |
262 |
71.0 |
85.8 |
(tr|G7KSU2) DELLA protein GAIP OS=Medicago truncatula GN=MTR_7g109580 PE=4 SV=1 |
| TAIR_pep |
AT5G41920.1 |
82.4 |
31.5 |
53.9 |
| Symbols: | GRAS family transcription factor | chr5:16779982-16781199 FORWARD LENGTH=405 |
| Medicago |
Medtr7g109580.1 |
262 |
71.0 |
85.8 |
| GRAS family transcription factor | HC | chr7:44838783-44836902 | 20130731 |
| Soybean |
Glyma19g40440.1 |
245 |
70.2 |
83.1 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4851630.1 |
length: 206 aa. |
| IPR005202 |
Transcription factor GRAS |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03514 |
GRAS |
9.5e-37 |
22-201 |
| ProfileScan |
PS50985 |
GRAS |
22.181 |
1-206 |
| no_ID |
|
| HMMPanther |
PTHR31636 |
FAMILY |
2.8e-26 |
28-199 |
| Seg |
seg |
seg |
NA |
4-25 |
- Wolf-PSORT
Lj1g3v4851630.1 chlo 8, cyto 3, nucl 1, plas 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4851630.1 |
|