Miyakogusa Predicted Gene

Lj1g3v4838380.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NBE2_SOYBN 557 72.3 82.2 (tr|I1NBE2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G47310.1 187 35.5 48.0 | Symbols: | flowering time control protein-related / FCA gamma-related | chr2:19423791-19426846 FORWARD LENGTH=512
Medicago Medtr7g109810.1 521 69.1 77.7 | flowering time control FCA-like protein | HC | chr7:44985779-44978011 | 20130731
Soybean Glyma19g40570.2 557 72.3 82.2  
LJGI gnl|LJGI|TC61021 936 100.0 100.0 weakly similar to UniRef100_Q6DN79 Cluster: FCA gamma protein; n=1; Lolium perenne|Rep: FCA gamma protein - Lolium perenne (Perennial ryegrass), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4838380.1 length: 378 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 4e-15 71-132
HMMSmart SM00360 RNA 8.3e-16 70-140
ProfileScan PS50102 RRM 15.630 69-144
IPR001202 WW domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF00397 WW 7.4e-07 304-331
HMMSmart SM00456 Domain 8.8e-05 301-333
ProfileScan PS50020 WW_DOMAIN_2 11.211 306-333
superfamily SSF51045 WW 1.4e-09 304-341
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 5.4e-24 3-154
no_ID  
Gene3D G3DSA:2.20.70.10 no description 1.1e-11 304-334
HMMPanther PTHR24011 FAMILY 2.7e-38 1-300
HMMPanther PTHR24011:SF136SUBFAMILY NOT 2.7e-38 1-300
Seg seg seg NA 338-351
superfamily SSF54928 RNA-binding 1.3e-05 52-163
1-50
Wolf-PSORT
Lj1g3v4838380.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4838380.1