| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1NBG4_SOYBN | 551 | 80.5 | 86.9 | (tr|I1NBG4) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT1G02460.1 | 450 | 65.7 | 78.4 | | Symbols: | Pectin lyase-like superfamily protein | chr1:504897-507099 REVERSE LENGTH=491 |
| Medicago | Medtr1g086390.1 | 508 | 74.2 | 83.9 | | polygalacturonase/glycoside hydrolase family protein | HC | chr1:38659765-38662894 | 20130731 |
| Soybean | Glyma19g40740.1 | 551 | 80.5 | 86.9 | |
| LJGI | --No_Hits-- |
| Lj1g3v4831740.1 | length: 329 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 4.3e-86 | 13-282 |
| PatternScan | PS00502 | POLYGALACTURONASE | NA | 153-166 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 1.2e+03 | 73-95 96-122 123-144 146-166 176-197 205-226 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 1e-101 | 3-322 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 4e-103 | 3-301 |
| no_ID | ||||
| HMMPanther | PTHR31375 | FAMILY | 2e-154 | 1-329 |
| HMMPanther | PTHR31375:SF0 | SUBFAMILY | 2e-154 | 1-329 |
| Seg | seg | seg | NA | 157-172 200-208 |
Lj1g3v4831740.1 nucl 6, cyto 4, extr 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v4831740.1 |