Miyakogusa Predicted Gene

Lj1g3v4830240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NBI4_SOYBN 970 94.6 98.3 (tr|I1NBI4) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G62120.2 880 85.3 91.3 | Symbols: | Class II aaRS and biotin synthetases superfamily protein | chr3:23001227-23003849 REVERSE LENGTH=530
Medicago Medtr7g110660.1 949 92.4 95.7 | prolyl-tRNA synthetase family protein | HC | chr7:45351361-45357257 | 20130731
Soybean Glyma19g40930.4 970 94.6 98.3  
LJGI gnl|LJGI|TC62134 1832 99.3 99.3 homologue to UniRef100_A7Q0Z4 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (57%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4830240.1 length: 519 aa.
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00587 tRNA-synt_2b 5.3e-18 81-221
IPR002316 Proline-tRNA ligase, class IIa
Molecular Function GO:0004827 proline-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006433 prolyl-tRNA aminoacylation    
FPrintScan PR01046 TRNASYNTHPRO 4.1e-09 97-115
138-149
168-176
178-189
IPR004154 Anticodon-binding
Gene3D G3DSA:3.40.50.800 no description 6.2e-47 317-437
HMMPfam PF03129 HGTP_anticodon 3.3e-19 323-420
superfamily SSF52954 Class 1e-33 311-439
IPR004499 Proline-tRNA ligase, class IIa, archaeal-type
Molecular Function GO:0004827 proline-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006433 prolyl-tRNA aminoacylation    
HAMAP MF_01571 Pro_tRNA_synth_type3 37.643 39-519
HMMPanther PTHR11451:SF6 PROLYL-TRNA 2.4e-271 26-459
HMMTigr TIGR00408 proS_fam_I: 7.9e-176 40-519
IPR006195 Aminoacyl-tRNA synthetase, class II
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
ProfileScan PS50862 AA_TRNA_LIGASE_II 19.494 78-316
IPR016061 Proline-tRNA ligase, class II, C-terminal
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004827 proline-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006433 prolyl-tRNA aminoacylation    
Gene3D G3DSA:3.30.110.30 no description 7.4e-18 442-518
HMMPfam PF09180 ProRS-C_1 1.4e-24 446-519
HMMSmart SM00946 Prolyl-tRNA 4e-31 446-519
IPR017449 Prolyl-tRNA synthetase, class II
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004827 proline-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006433 prolyl-tRNA aminoacylation    
superfamily SSF64586 C-terminal 6.3e-20 440-519
no_ID  
Coil coil coiled-coil NA 414-435
Gene3D G3DSA:3.30.930.10 no description 1.8e-116 36-316
HMMPanther PTHR11451 TRNA 2.4e-271 26-459
Seg seg seg NA 7-35
superfamily SSF55681 Class 2.1e-77 43-310
Wolf-PSORT
Lj1g3v4830240.1	cyto 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4830240.1