Miyakogusa Predicted Gene
- Lj1g3v4819990.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KGH6_SOYBN |
957 |
85.8 |
93.8 |
(tr|K7KGH6) Glucose-1-phosphate adenylyltransferase OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT1G27680.1 |
697 |
68.3 |
83.8 |
| Symbols: APL2 | ADPGLC-PPase large subunit | chr1:9631630-9634450 FORWARD LENGTH=518 |
| Medicago |
Medtr7g111020.1 |
920 |
83.7 |
90.9 |
| glucose-1-phosphate adenylyltransferase family protein | HC | chr7:45519287-45514880 | 20130731 |
| Soybean |
Glyma19g41100.1 |
892 |
80.5 |
87.7 |
|
| LJGI |
gnl|LJGI|TC61551 |
77.8 |
80.3 |
80.3 |
similar to UniRef100_Q9AT07 Cluster: Glucose-1-phosphate adenylyltransferase; n=1; Cicer arietinum|Rep: Glucose-1-phosphate adenylyltransferase - Cicer arietinum (Chickpea) (Garbanzo), partial (87%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4819990.2 |
length: 536 aa. |
| IPR005835 |
Nucleotidyl transferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016779 |
nucleotidyltransferase activity |
|
|
| HMMPfam |
PF00483 |
NTP_transferase |
5.5e-77 |
105-381 |
| IPR005836 |
ADP-glucose pyrophosphorylase, conserved site |
| Biological Process |
GO:0005978 |
glycogen biosynthetic process |
|
|
| PatternScan |
PS00809 |
ADP_GLC_PYROPHOSPH_2 |
NA |
200-208 |
| PatternScan |
PS00810 |
ADP_GLC_PYROPHOSPH_3 |
NA |
315-325 |
| IPR011004 |
Trimeric LpxA-like |
| Molecular Function |
GO:0016740 |
transferase activity |
|
|
| superfamily |
SSF51161 |
Trimeric |
1.6e-27 |
398-536 |
| IPR011831 |
Glucose-1-phosphate adenylyltransferase |
| Biological Process |
GO:0005978 |
glycogen biosynthetic process |
|
|
| Molecular Function |
GO:0008878 |
glucose-1-phosphate adenylyltransferase activity |
|
|
| HMMTigr |
TIGR02091 |
glgC: |
1.3e-137 |
104-500 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.550.10 |
no description |
5.2e-70 |
106-452 |
| HMMPanther |
PTHR22572 |
SUGAR-1-PHOSPHATE |
1.3e-228 |
71-536 |
| HMMPanther |
PTHR22572:SF10 |
GLUCOSE-1-PHOSPHATE |
1.3e-228 |
71-536 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
4.5e-78 |
103-498 |
- Wolf-PSORT
Lj1g3v4819990.2 nucl 7, cyto 3, chlo 2, cysk 1, golg 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4819990.2 |
|