Miyakogusa Predicted Gene

Lj1g3v4819940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q2HUZ9_MEDTR 545 69.3 80.8 (tr|Q2HUZ9) Pentatricopeptide repeat OS=Medicago truncatula GN=MTR_7g111120 PE=4 SV=1
TAIR_pep AT1G05750.1 244 35.9 58.9 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:1721523-1723025 FORWARD LENGTH=500
Medicago Medtr7g111120.1 545 69.3 80.8 | PPR containing plant-like protein | HC | chr7:45588277-45586755 | 20130731
Soybean Glyma01g37890.1 265 37.6 61.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4819940.1 length: 390 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.25 291-316
HMMPfam PF12854 PPR_1 2.2e-07 81-108
HMMPfam PF13041 PPR_2 6.6e-09 217-264
HMMTigr TIGR00756 PPR: 0.00012 84-110
220-253
255-286
ProfileScan PS51375 PPR 7.103 82-116
118-148
217-251
186-216
149-185
252-286
287-317
319-349
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00021 289-375
no_ID  
HMMPanther PTHR24015 FAMILY 1.8e-121 1-378
HMMPanther PTHR24015:SF136SUBFAMILY NOT 1.8e-121 1-378
Wolf-PSORT
Lj1g3v4819940.1	cyto 9, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4819940.1