Miyakogusa Predicted Gene

Lj1g3v4807720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JR12_SOYBN 1002 78.0 85.4 (tr|I1JR12) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G22070.1 490 38.8 54.8 | Symbols: | pentatricopeptide (PPR) repeat-containing protein | chr2:9383602-9385962 FORWARD LENGTH=786
Medicago Medtr1g111020.2 491 42.5 59.4 | pentatricopeptide (PPR) repeat protein | HC | chr1:50134416-50129873 | 20130731
Soybean Glyma03g38690.1 1002 78.0 85.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4807720.1 length: 637 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.45 102-126
130-157
204-224
305-331
406-429
HMMPfam PF13041 PPR_2 3e-10 27-74
230-275
331-378
HMMTigr TIGR00756 PPR: 0.0015 29-62
232-266
333-365
368-401
ProfileScan PS51375 PPR 6.939 27-61
128-163
97-127
230-264
199-229
164-198
331-365
300-330
366-401
402-432
434-464
468-502
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.1e-07 401-489
no_ID  
HMMPanther PTHR24015 FAMILY 2e-260 20-637
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 2e-260 20-637
HMMPfam PF14432 DYW_deaminase 7.9e-12 516-626
Seg seg seg NA 267-283
Wolf-PSORT
Lj1g3v4807720.1	chlo 7, mito 5, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4807720.1