Miyakogusa Predicted Gene

Lj1g3v4807560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T461_LOTJA 509 86.5 86.5 (tr|I3T461) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G26610.3 313 59.7 74.0 | Symbols: | D111/G-patch domain-containing protein | chr5:9375456-9376991 FORWARD LENGTH=301
Medicago Medtr7g111520.1 397 74.6 82.6 | D111/G-patch domain protein | HC | chr7:45767228-45771675 | 20130731
Soybean Glyma19g41310.1 449 80.6 86.6  
LJGI gnl|LJGI|TC58525 1764 99.1 99.1 similar to UniRef100_Q2HRQ8 Cluster: D111/G-patch; Zinc finger, C2H2-type; n=1; Medicago truncatula|Rep: D111/G-patch; Zinc finger, C2H2-type - Medicago truncatula (Barrel medic), partial (61%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4807560.1 length: 304 aa.
IPR000467 G-patch domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF01585 G-patch 1.1e-16 67-107
HMMSmart SM00443 glycine 3.6e-18 64-109
ProfileScan PS50174 G_PATCH 16.887 66-111
IPR007087 Zinc finger, C2H2
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 163-185
IPR022755 Zinc finger, double-stranded RNA binding
HMMPfam PF12171 zf-C2H2_jaz 5.6e-05 161-188
no_ID  
Coil coil coiled-coil NA 116-144
HMMPanther PTHR17614 ZINC 6.3e-30 43-230
HMMPanther PTHR17614:SF1 SUBFAMILY 6.3e-30 43-230
Seg seg seg NA 4-19
206-217
264-275
Wolf-PSORT
Lj1g3v4807560.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4807560.1