Miyakogusa Predicted Gene

Lj1g3v4790740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NBQ2_SOYBN 800 92.0 97.1 (tr|I1NBQ2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G56590.1 722 80.7 91.5 | Symbols: ZIP4 | Clathrin adaptor complexes medium subunit family protein | chr1:21202250-21204697 REVERSE LENGTH=415
Medicago Medtr7g111870.3 788 91.1 95.7 | clathrin adaptor complexes medium subunit family protein | HC | chr7:45960804-45965006 | 20130731
Soybean Glyma19g41520.1 800 92.0 97.1  
LJGI gnl|LJGI|TC67854 1421 100.0 100.0 similar to UniRef100_A7PRN6 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4790740.1 length: 415 aa.
IPR001392 Clathrin adaptor, mu subunit
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
FPrintScan PR00314 CLATHRINADPT 4.2e-22 100-127
230-257
337-348
HMMPIR PIRSF005992 Adaptor 4.8e-162 1-415
IPR008968 Clathrin adaptor, mu subunit, C-terminal
Molecular Function GO:0005515 protein binding    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF00928 Adap_comp_sub 2.2e-61 167-414
ProfileScan PS51072 MHD 65.215 175-415
superfamily SSF49447 Second 4.6e-67 167-415
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 4.9e-38 1-143
IPR018240 Clathrin adaptor, mu subunit, conserved site
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
PatternScan PS00990 CLAT_ADAPTOR_M_1 NA 167-187
no_ID  
Gene3D G3DSA:2.60.40.1170 no description 2.7e-41 167-314
Gene3D G3DSA:3.30.450.60 no description 6.4e-35 1-142
HMMPanther PTHR11998 CLATHRIN 1e-151 1-414
HMMPanther PTHR11998:SF4 CLATHRIN 1e-151 1-414
Wolf-PSORT
Lj1g3v4790740.1	nucl 7, cyto 5, chlo 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4790740.1 Not targeted -31.895 -0.719 -1.750 34.63% -29.426