Miyakogusa Predicted Gene

Lj1g3v4790660.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1NBR0_SOYBN 1879 83.7 89.3 (tr|I1NBR0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G56500.1 1498 68.5 80.1 | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr1:21159775-21167092 FORWARD LENGTH=1055
Medicago Medtr7g112140.1 1879 83.8 90.5 | haloacid dehalogenase-like hydrolase family protein | HC | chr7:46103790-46120290 | 20130731
Soybean Glyma19g41590.1 1863 82.1 87.7  
LJGI gnl|LJGI|TC70016 1804 100.0 100.0 similar to UniRef100_A7PRQ1 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4790660.3 length: 1089 aa.
IPR000033 LDLR class B repeat
method AccNumber shortName E-value location
HMMSmart SM00135 Low-density 1.3e+02 593-635
765-807
IPR001258 NHL repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF01436 NHL 3e-06 656-681
836-863
IPR005833 Haloacid dehalogenase/epoxide hydrolase
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016787 hydrolase activity    
FPrintScan PR00413 HADHALOGNASE 1.7e-08 80-91
178-191
210-226
228-248
IPR006402 HAD-superfamily hydrolase, subfamily IA, variant 3
Molecular Function GO:0016787 hydrolase activity    
HMMTigr TIGR01509 HAD-SF-IA-v3: 7.7e-13 207-266
IPR011042 Six-bladed beta-propeller, TolB-like
Gene3D G3DSA:2.120.10.30 no description 4.8e-57 598-921
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 1.1e-37 422-570
ProfileScan PS51352 THIOREDOXIN_2 10.946 424-570
superfamily SSF52833 Thioredoxin-like 8.5e-29 424-568
IPR013017 NHL repeat, subgroup
ProfileScan PS51125 NHL 4.277 599-631
651-681
707-741
772-803
836-866
890-921
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 1.9e-41 168-290
HMMPfam PF13419 HAD_2 5.7e-26 83-266
superfamily SSF56784 HAD-like 1.8e-46 80-290
no_ID  
HMMPanther PTHR24104 FAMILY 8.3e-147 401-1077
HMMPanther PTHR24104:SF0 SUBFAMILY 8.3e-147 401-1077
HMMPfam PF13905 Thioredoxin_8 1.2e-10 453-547
Seg seg seg NA 11-29
249-259
765-771
superfamily SSF101898 NHL 1.5e-42 588-926
Wolf-PSORT
Lj1g3v4790660.3	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4790660.3