Miyakogusa Predicted Gene

Lj1g3v4790660.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1NBR0_SOYBN 1311 87.5 93.2 (tr|I1NBR0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G56500.1 1095 72.3 84.0 | Symbols: | haloacid dehalogenase-like hydrolase family protein | chr1:21159775-21167092 FORWARD LENGTH=1055
Medicago Medtr7g112140.1 1320 87.9 94.5 | haloacid dehalogenase-like hydrolase family protein | HC | chr7:46103790-46120290 | 20130731
Soybean Glyma19g41590.1 1306 87.5 93.2  
LJGI gnl|LJGI|FS350697 712 100.0 100.0 similar to UniRef100_A7PRQ1 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4790660.2 length: 711 aa.
IPR000033 LDLR class B repeat
method AccNumber shortName E-value location
HMMSmart SM00135 Low-density 1.3e+02 215-257
387-429
IPR001258 NHL repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF01436 NHL 1.8e-06 278-303
458-485
IPR011042 Six-bladed beta-propeller, TolB-like
Gene3D G3DSA:2.120.10.30 no description 1.8e-57 220-543
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 1.7e-37 51-191
ProfileScan PS51352 THIOREDOXIN_2 10.946 46-192
superfamily SSF52833 Thioredoxin-like 8.5e-29 46-190
IPR013017 NHL repeat, subgroup
ProfileScan PS51125 NHL 4.277 221-253
273-303
329-363
394-425
458-488
512-543
no_ID  
HMMPanther PTHR24104 FAMILY 8.3e-147 23-699
HMMPanther PTHR24104:SF0 SUBFAMILY 8.3e-147 23-699
HMMPfam PF13905 Thioredoxin_8 6.9e-11 75-169
Seg seg seg NA 387-393
superfamily SSF101898 NHL 1.5e-42 210-548
Wolf-PSORT
Lj1g3v4790660.2	chlo 6, nucl 4, cyto 1, pero 1, golg 1, cyto_pero 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4790660.2