Miyakogusa Predicted Gene

Lj1g3v4779510.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7KGK8_SOYBN 1103 67.8 76.3 (tr|K7KGK8) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G26910.1 256 29.4 46.5 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). | chr5:9466169-9469523 REVERSE LENGTH=853

Medicago Medtr7g112030.1 1025 65.1 75.0 | DUF4378 domain protein | HC | chr7:46055200-46060028 | 20130731

Soybean Glyma19g41710.1 986 62.2 70.7

LJGI gnl|LJGI|TC70024 823 99.5 99.5 weakly similar to UniRef100_A7PRU4 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4779510.1 length: 849 aa.

IPR025486 Domain of unknown function DUF4378

method AccNumber shortName E-value location

HMMPfam PF14309 DUF4378 4.4e-28 688-841

no_ID

HMMPanther PTHR21726 PHOSPHATIDYLINOSITOL 6.8e-20 675-849

HMMPanther PTHR21726:SF25 SUBFAMILY 6.8e-20 675-849

HMMPfam PF14383 VARLMGL 1.1e-11 15-38

Seg seg seg NA 492-503
518-527

Wolf-PSORT

Lj1g3v4779510.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4779510.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7KGK8_SOYBN	1103	67.8	76.3	(tr\|K7KGK8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G26910.1	256	29.4	46.5	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58650.1); Has 1322 Blast hits to 684 proteins in 162 species: Archae - 4; Bacteria - 497; Metazoa - 157; Fungi - 101; Plants - 155; Viruses - 0; Other Eukaryotes - 408 (source: NCBI BLink). \| chr5:9466169-9469523 REVERSE LENGTH=853
Medicago	Medtr7g112030.1	1025	65.1	75.0	\| DUF4378 domain protein \| HC \| chr7:46055200-46060028 \| 20130731
Soybean	Glyma19g41710.1	986	62.2	70.7
LJGI	gnl\|LJGI\|TC70024	823	99.5	99.5	weakly similar to UniRef100_A7PRU4 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)

IPR025486	Domain of unknown function DUF4378
Lj1g3v4779510.1				length: 849 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF14309	DUF4378	4.4e-28	688-841
no_ID
HMMPanther	PTHR21726	PHOSPHATIDYLINOSITOL	6.8e-20	675-849
HMMPanther	PTHR21726:SF25	SUBFAMILY	6.8e-20	675-849
HMMPfam	PF14383	VARLMGL	1.1e-11	15-38
Seg	seg	seg	NA	492-503 518-527