Miyakogusa Predicted Gene

Lj1g3v4766270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KWI7_MEDTR 765 63.8 72.0 (tr|G7KWI7) PHD and RING finger domain-containing protein OS=Medicago truncatula GN=MTR_7g112410 PE=4 SV=1
TAIR_pep AT3G05670.1 444 45.7 58.0 | Symbols: | RING/U-box protein | chr3:1653888-1657022 FORWARD LENGTH=883
Medicago Medtr7g112410.1 765 63.8 72.0 | poxvirus Ag35 surface protein | HC | chr7:46190529-46186663 | 20130731
Soybean Glyma20g38280.1 738 66.3 73.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4766270.1 length: 857 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 6.5e-08 377-421
HMMSmart SM00184 Ring 2.8e-05 378-419
ProfileScan PS50089 ZF_RING_2 12.120 378-420
IPR001965 Zinc finger, PHD-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 2.9e-08 470-515
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 3.5e-16 433-515
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.7e-11 375-423
460-521
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 397-406
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 5.8e-10 471-516
ProfileScan PS50016 ZF_PHD_2 9.632 468-517
no_ID  
Coil coil coiled-coil NA 300-321
HMMPanther PTHR15242 SPLICING 1.2e-66 283-546
HMMPanther PTHR15242:SF0 SUBFAMILY 1.2e-66 283-546
Seg seg seg NA 21-41
56-74
113-129
133-191
214-231
234-246
262-276
280-294
313-327
565-593
superfamily SSF57850 RING/U-box 1.1e-12 371-426
Wolf-PSORT
Lj1g3v4766270.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4766270.1