Miyakogusa Predicted Gene

Lj1g3v4765240.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7MZV0_SOYBN 1196 68.1 75.2 (tr|K7MZV0) Uncharacterized protein OS=Glycine max PE=3 SV=1

TAIR_pep AT5G27000.1 818 52.0 64.2 | Symbols: ATK4, KATD | kinesin 4 | chr5:9498099-9502951 FORWARD LENGTH=987

Medicago Medtr7g112420.2 1184 68.6 76.0 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr7:46213845-46220263 | 20130731

Soybean Glyma19g41800.1 1148 66.4 73.7

LJGI --No_Hits--

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4765240.1 length: 892 aa.

IPR001752 Kinesin, motor domain

method AccNumber shortName E-value location

Molecular Function GO:0003777 microtubule motor activity

Molecular Function GO:0005524 ATP binding

Cellular Component GO:0005875 microtubule associated complex

Biological Process GO:0007018 microtubule-based movement

FPrintScan PR00380 KINESINHEAVY 9.7e-41 362-383
484-501
515-533
564-585

Gene3D G3DSA:3.40.850.10 no description 1.2e-123 285-620

HMMPfam PF00225 Kinesin 1.8e-108 293-613

HMMSmart SM00129 Kinesin 3.5e-166 285-622

ProfileScan PS50067 KINESIN_MOTOR_DOMAIN2 50.358 284-545

IPR019821 Kinesin, motor region, conserved site

Molecular Function GO:0003777 microtubule motor activity

Molecular Function GO:0005524 ATP binding

Biological Process GO:0007018 microtubule-based movement

PatternScan PS00411 KINESIN_MOTOR_DOMAIN1 NA 514-525

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 3.6e-122 242-614

no_ID

Coil coil coiled-coil NA 124-145
267-288
628-649

HMMPanther PTHR24115 FAMILY 7.6e-277 167-648

HMMPanther PTHR24115:SF184SUBFAMILY NOT 7.6e-277 167-648

Seg seg seg NA 161-172
636-650
760-774
827-844

Wolf-PSORT

Lj1g3v4765240.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4765240.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7MZV0_SOYBN	1196	68.1	75.2	(tr\|K7MZV0) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep	AT5G27000.1	818	52.0	64.2	\| Symbols: ATK4, KATD \| kinesin 4 \| chr5:9498099-9502951 FORWARD LENGTH=987
Medicago	Medtr7g112420.2	1184	68.6	76.0	\| P-loop nucleoside triphosphate hydrolase superfamily protein \| HC \| chr7:46213845-46220263 \| 20130731
Soybean	Glyma19g41800.1	1148	66.4	73.7
LJGI	--No_Hits--

IPR001752	Kinesin, motor domain
Lj1g3v4765240.1				length: 892 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003777	microtubule motor activity
Molecular Function	GO:0005524	ATP binding
Cellular Component	GO:0005875	microtubule associated complex
Biological Process	GO:0007018	microtubule-based movement
FPrintScan	PR00380	KINESINHEAVY	9.7e-41	362-383 484-501 515-533 564-585
Gene3D	G3DSA:3.40.850.10	no description	1.2e-123	285-620
HMMPfam	PF00225	Kinesin	1.8e-108	293-613
HMMSmart	SM00129	Kinesin	3.5e-166	285-622
ProfileScan	PS50067	KINESIN_MOTOR_DOMAIN2	50.358	284-545
IPR019821	Kinesin, motor region, conserved site
Molecular Function	GO:0003777	microtubule motor activity
Molecular Function	GO:0005524	ATP binding
Biological Process	GO:0007018	microtubule-based movement
PatternScan	PS00411	KINESIN_MOTOR_DOMAIN1	NA	514-525
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	3.6e-122	242-614
no_ID
Coil	coil	coiled-coil	NA	124-145 267-288 628-649
HMMPanther	PTHR24115	FAMILY	7.6e-277	167-648
HMMPanther	PTHR24115:SF184SUBFAMILY	NOT	7.6e-277	167-648
Seg	seg	seg	NA	161-172 636-650 760-774 827-844