Miyakogusa Predicted Gene
- Lj1g3v4765200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NBT4_SOYBN |
791 |
91.2 |
94.4 |
(tr|I1NBT4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G09160.1 |
658 |
77.3 |
85.8 |
| Symbols: | Protein phosphatase 2C family protein | chr1:2953199-2955059 REVERSE LENGTH=428 |
| Medicago |
Medtr7g112430.1 |
775 |
90.2 |
95.1 |
| protein phosphatase 2C family protein | HC | chr7:46222163-46225753 | 20130731 |
| Soybean |
Glyma19g41810.1 |
791 |
91.2 |
94.4 |
|
| LJGI |
gnl|LJGI|TC59700 |
1475 |
99.5 |
99.5 |
similar to UniRef100_A7PRW3 Cluster: Chromosome chr14 scaffold_27, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_27, whole genome shotgun sequence - Vitis vinifera (Grape), partial (83%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4765200.1 |
length: 431 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
5.2e-55 |
41-300 |
| HMMPfam |
PF00481 |
PP2C |
2e-35 |
65-284 |
| HMMSmart |
SM00331 |
Sigma |
0.00036 |
53-300 |
| HMMSmart |
SM00332 |
Serine/threonine |
9.9e-62 |
26-298 |
| superfamily |
SSF81606 |
PP2C-like |
4.5e-51 |
14-300 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
1.5e-222 |
19-412 |
| no_ID |
|
| HMMPanther |
PTHR13832:SF157PROTEIN |
PHOSPHATASE |
1.5e-222 |
19-412 |
- Wolf-PSORT
Lj1g3v4765200.1 chlo 7, nucl 2, cyto 2, plas 2, cyto_nucl 2, nucl_plas 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4765200.1 |
|