Miyakogusa Predicted Gene

Lj1g3v4765020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJ44_LOTJA 238 67.6 68.1 (tr|I3SJ44) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G03180.1 80.5 60.3 81.0 | Symbols: | CONTAINS InterPro DOMAIN/s: rRNA processing (InterPro:IPR013730); Has 898 Blast hits to 687 proteins in 142 species: Archae - 2; Bacteria - 28; Metazoa - 200; Fungi - 99; Plants - 63; Viruses - 0; Other Eukaryotes - 506 (source: NCBI BLink). | chr4:1403289-1404663 FORWARD LENGTH=185
Medicago Medtr7g108100.1 124 44.0 55.0 | rRNA processing protein | HC | chr7:43968091-43964306 | 20130731
Soybean Glyma19g39440.1 153 48.9 55.9  
LJGI gnl|LJGI|TC57561 688 100.0 100.0 similar to UniRef100_A7PTZ0 Cluster: Chromosome chr7 scaffold_31, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_31, whole genome shotgun sequence - Vitis vinifera (Grape), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4765020.1 length: 188 aa.
IPR013730 rRNA processing
method AccNumber shortName E-value location
HMMPfam PF08524 rRNA_processing 1.9e-08 56-184
no_ID  
Coil coil coiled-coil NA 85-106
113-159
Seg seg seg NA 96-111
116-159
Wolf-PSORT
Lj1g3v4765020.1	nucl 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4765020.1