Miyakogusa Predicted Gene

Lj1g3v4764520.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MZF7_SOYBN 865 64.1 74.5 (tr|K7MZF7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G62000.3 414 58.7 72.4 | Symbols: ARF2, ARF1-BP, HSS, ORE14 | auxin response factor 2 | chr5:24910859-24914680 FORWARD LENGTH=859
Medicago Medtr2g005240.1 431 40.8 54.3 | auxin response factor 2 | HC | chr2:92911-103331 | 20130731
Soybean Glyma19g39340.1 703 62.3 73.4  
LJGI gnl|LJGI|TC72914 54.0 92.3 92.3 similar to UniRef100_Q56YP4 Cluster: ARF1-binding protein; n=1; Arabidopsis thaliana|Rep: ARF1-binding protein - Arabidopsis thaliana (Mouse-ear cress), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4764520.2 length: 657 aa.
IPR003311 AUX/IAA protein
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02309 AUX_IAA 5.1e-22 536-648
IPR003340 B3 DNA binding domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.8e-22 137-237
HMMSmart SM01019 B3 2e-22 137-239
ProfileScan PS50863 B3 12.929 137-239
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 6.1e-24 265-346
IPR011525 Aux/IAA-ARF-dimerisation
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 23.052 559-641
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 4.8e-36 131-247
superfamily SSF101936 DNA-binding 3.9e-38 120-269
no_ID  
HMMPanther PTHR31384 FAMILY 3e-162 5-375
Seg seg seg NA 612-622
superfamily SSF54277 CAD 2.2e-08 546-635
Wolf-PSORT
Lj1g3v4764520.2	nucl 11, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4764520.2