Miyakogusa Predicted Gene

Lj1g3v4763880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JQE1_SOYBN 2142 81.1 88.7 (tr|I1JQE1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G11960.1 1611 62.0 75.3 | Symbols: | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein | chr3:3786431-3793160 FORWARD LENGTH=1379
Medicago Medtr7g107350.1 2081 77.9 85.1 | pre-mRNA-splicing factor RSE1-like protein | HC | chr7:43803096-43788689 | 20130731
Soybean Glyma03g36490.1 2142 81.1 88.7  
LJGI gnl|LJGI|DC593113 543 100.0 100.0 weakly similar to UniRef100_A7PW25 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4763880.1 length: 1330 aa.
IPR004871 Cleavage/polyadenylation specificity factor, A subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03178 CPSF_A 9.2e-33 932-1005
1064-1317
no_ID  
HMMPanther PTHR10644 DNA 2.9e-234 24-1326
HMMPanther PTHR10644:SF1 SPLICING 2.9e-234 24-1326
HMMPfam PF10433 MMS1_N 2.7e-79 108-618
Seg seg seg NA 9-33
1039-1053
Wolf-PSORT
Lj1g3v4763880.1	cyto_nucl 5, nucl 4.5, cyto 4.5, E.R. 3, chlo 1, plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4763880.1