Miyakogusa Predicted Gene

Lj1g3v4763790.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JQD8_SOYBN 670 80.2 84.5 (tr|I1JQD8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G58460.1 550 66.9 77.5 | Symbols: ATRBL15, RBL15 | RHOMBOID-like protein 15 | chr3:21623374-21626348 REVERSE LENGTH=403
Medicago Medtr7g107390.1 640 80.0 84.1 | rhomboid family protein | HC | chr7:43813742-43820538 | 20130731
Soybean Glyma03g36460.1 670 80.2 84.5  
LJGI gnl|LJGI|TC58179 1433 100.0 100.0 similar to UniRef100_A7Q023 Cluster: Chromosome chr8 scaffold_41, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_41, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4763790.1 length: 402 aa.
IPR000449 Ubiquitin-associated/translation elongation factor EF1B, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00627 UBA 1.6e-08 362-397
IPR009060 UBA-like
Molecular Function GO:0005515 protein binding    
superfamily SSF46934 UBA-like 1.3e-11 332-400
IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote
HMMSmart SM00165 Ubiquitin 1.5e-08 362-399
ProfileScan PS50030 UBA 14.282 360-400
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 1e-24 28-218
HMMPfam PF01694 Rhomboid 1.6e-22 65-219
no_ID  
Gene3D G3DSA:1.10.8.10 no description 5.4e-10 363-400
HMMPanther PTHR22790 RHOMBOID-RELATED 3.8e-121 1-332
HMMPanther PTHR22790:SF7 RHOMBOID-RELATED 3.8e-121 1-332
Seg seg seg NA 185-194
226-239
346-351
superfamily SSF144091 Rhomboid-like 2.7e-30 24-226
Wolf-PSORT
Lj1g3v4763790.1	plas 7, E.R. 4, mito 2, E.R._vacu 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4763790.1