Miyakogusa Predicted Gene

Lj1g3v4753230.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1NAX1_SOYBN 864 70.2 79.3 (tr|I1NAX1) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G54750.3 485 45.5 60.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. | chr3:20264833-20268416 REVERSE LENGTH=590

Medicago Medtr7g106900.1 807 66.8 75.5 | downstream neighbor of Son-like protein, putative | HC | chr7:43552486-43560669 | 20130731

Soybean Glyma19g38990.1 864 70.2 79.3

LJGI gnl|LJGI|BP055991 460 98.8 98.8 similar to UniRef100_A7QFV0 Cluster: Chromosome undetermined scaffold_89, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_89, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4753230.1 length: 621 aa.

IPR024861 Donson

method AccNumber shortName E-value location

FPrintScan PR02064 DONSON 5e-11 237-249
328-341
341-356

HMMPanther PTHR12972 DOWNSTREAM 6.1e-52 20-619

no_ID

Seg seg seg NA 296-309
569-580

Wolf-PSORT

Lj1g3v4753230.1 chlo 10, nucl 2, cysk 2, cysk_nucl 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4753230.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1NAX1_SOYBN	864	70.2	79.3	(tr\|I1NAX1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G54750.3	485	45.5	60.2	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages. \| chr3:20264833-20268416 REVERSE LENGTH=590
Medicago	Medtr7g106900.1	807	66.8	75.5	\| downstream neighbor of Son-like protein, putative \| HC \| chr7:43552486-43560669 \| 20130731
Soybean	Glyma19g38990.1	864	70.2	79.3
LJGI	gnl\|LJGI\|BP055991	460	98.8	98.8	similar to UniRef100_A7QFV0 Cluster: Chromosome undetermined scaffold_89, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_89, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)

IPR024861	Donson
Lj1g3v4753230.1				length: 621 aa.
method	AccNumber	shortName	E-value	location
FPrintScan	PR02064	DONSON	5e-11	237-249 328-341 341-356
HMMPanther	PTHR12972	DOWNSTREAM	6.1e-52	20-619
no_ID
Seg	seg	seg	NA	296-309 569-580