| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1JQC1_SOYBN | 712 | 75.8 | 84.4 | (tr|I1JQC1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G33270.1 | 670 | 71.3 | 81.6 | | Symbols: CDC20.1 | Transducin family protein / WD-40 repeat family protein | chr4:16044545-16046590 REVERSE LENGTH=457 |
| Medicago | Medtr7g106870.1 | 690 | 75.4 | 85.0 | | transducin family protein/WD-40 repeat protein | HC | chr7:43528726-43526248 | 20130731 |
| Soybean | Glyma03g36300.1 | 712 | 75.8 | 84.4 | |
| LJGI | gnl|LJGI|TC71885 | 1035 | 100.0 | 100.0 | similar to UniRef100_A7PBF4 Cluster: Chromosome chr16 scaffold_10, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_10, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%) |
| Lj1g3v4753210.1 | length: 450 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00400 | WD40 | 6e-07 | 172-204 253-288 301-339 390-424 |
| HMMSmart | SM00320 | WD40 | 1.8e-05 | 166-204 207-245 249-288 297-339 342-382 385-424 |
| ProfileScan | PS50082 | WD_REPEATS_2 | 12.814 | 172-213 256-288 392-425 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:2.130.10.10 | no description | 3.7e-60 | 140-431 |
| IPR017986 | WD40-repeat-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 31.191 | 154-433 |
| superfamily | SSF50978 | WD40 | 8.9e-60 | 144-443 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 326-340 411-425 |
| no_ID | ||||
| HMMPanther | PTHR19918 | CELL | 7.5e-214 | 23-450 |
| HMMPanther | PTHR19918:SF0 | SUBFAMILY | 7.5e-214 | 23-450 |
| Seg | seg | seg | NA | 99-115 |
Lj1g3v4753210.1 nucl 5, mito 4, cyto 2, cysk 2, cyto_mito 2, mito_plas 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v4753210.1 |