Miyakogusa Predicted Gene

Lj1g3v4752650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JQ98_SOYBN 433 71.8 81.3 (tr|I1JQ98) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G52380.1 296 61.9 83.9 | Symbols: CP33, PDE322 | chloroplast RNA-binding protein 33 | chr3:19421619-19422855 FORWARD LENGTH=329
Medicago Medtr7g106440.1 440 69.3 79.3 | 33 kDa ribonucleoprotein | HC | chr7:43324307-43322087 | 20130731
Soybean Glyma03g36130.1 433 71.8 81.3  
LJGI gnl|LJGI|TC65735 1068 100.0 100.0 similar to UniRef100_A7QQW1 Cluster: Chromosome undetermined scaffold_145, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_145, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4752650.1 length: 320 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 1.3e-18 113-182
216-286
HMMSmart SM00360 RNA 2.7e-25 112-185
215-288
ProfileScan PS50102 RRM 18.172 111-189
214-292
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 5.1e-23 94-190
205-291
no_ID  
HMMPanther PTHR24012 FAMILY 7.5e-91 14-317
HMMPanther PTHR24012:SF151SUBFAMILY NOT 7.5e-91 14-317
Seg seg seg NA 52-66
superfamily SSF54928 RNA-binding 2.1e-47 109-299
Wolf-PSORT
Lj1g3v4752650.1	chlo 10, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4752650.1