Miyakogusa Predicted Gene

Lj1g3v4724820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JPQ5_SOYBN 298 72.9 87.2 (tr|I1JPQ5) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G37570.1 174 52.9 65.1 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:14924494-14926146 REVERSE LENGTH=550
Medicago Medtr7g105440.1 315 76.3 88.9 | PPR containing plant-like protein | HC | chr7:42760641-42762768 | 20130731
Soybean Glyma03g34150.1 298 72.9 87.2  
LJGI gnl|LJGI|TC81661 1221 100.0 100.0 similar to UniRef100_A7PP85 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4724820.1 length: 207 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 4.6e-05 151-178
179-204
HMMPfam PF13041 PPR_2 1e-10 75-123
HMMTigr TIGR00756 PPR: 0.00012 79-112
151-178
179-204
ProfileScan PS51375 PPR 5.437 76-110
146-180
111-145
181-207
no_ID  
HMMPanther PTHR24015 FAMILY 4.3e-55 30-205
HMMPanther PTHR24015:SF139SUBFAMILY NOT 4.3e-55 30-205
Seg seg seg NA 1-17
Wolf-PSORT
Lj1g3v4724820.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4724820.1