Miyakogusa Predicted Gene

Lj1g3v4721720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6HQE5_VITVI 231 50.6 67.9 (tr|F6HQE5) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00930 PE=4 SV=1
TAIR_pep AT5G39710.1 212 48.5 68.6 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 238 53.6 67.9 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 157 41.2 58.4  
LJGI gnl|LJGI|DC593356 581 99.0 99.0 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4721720.1 length: 261 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.012 26-50
148-177
ProfileScan PS51375 PPR 9.613 23-58
110-144
145-179
no_ID  
HMMPanther PTHR24015 FAMILY 3.4e-13 23-191
HMMPanther PTHR24015:SF0 SUBFAMILY 3.4e-13 23-191
Wolf-PSORT
Lj1g3v4721720.1	cyto 8, nucl 3, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4721720.1