Miyakogusa Predicted Gene

Lj1g3v4717450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL O82458_LOTJA 939 94.1 94.3 (tr|O82458) Rac GTPase activating protein 1 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G22400.1 418 53.5 64.5 | Symbols: | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | chr5:7423050-7425335 REVERSE LENGTH=466
Medicago Medtr7g104900.1 650 76.2 81.9 | PAK-box/P21-Rho-binding domain Rho GTPase activating protein | HC | chr7:42531591-42525668 | 20130731
Soybean Glyma19g38120.1 695 72.5 79.6  
LJGI gnl|LJGI|TC58702 2930 99.9 99.9 UniRef100_O82458 Cluster: Rac GTPase activating protein 1; n=1; Lotus japonicus|Rep: Rac GTPase activating protein 1 - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4717450.1 length: 493 aa.
IPR000095 PAK-box/P21-Rho-binding
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:3.90.810.10 no description 1.6e-07 94-123
HMMPfam PF00786 PBD 5.5e-10 96-131
HMMSmart SM00285 P21-Rho-binding 2.1e-07 97-131
ProfileScan PS50108 CRIB 7.406 97-110
IPR000198 Rho GTPase-activating protein domain
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007165 signal transduction    
Gene3D G3DSA:1.10.555.10 no description 2e-34 130-311
HMMPfam PF00620 RhoGAP 9.4e-27 159-295
HMMSmart SM00324 GTPase-activator 1.2e-37 156-319
ProfileScan PS50238 RHOGAP 28.589 142-327
IPR008936 Rho GTPase activation protein
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007165 signal transduction    
superfamily SSF48350 GTPase 9.7e-38 134-316
no_ID  
HMMPanther PTHR23177 MKIAA1688 1.7e-197 46-464
HMMPanther PTHR23177:SF2 GTPASE 1.7e-197 46-464
Seg seg seg NA 46-58
121-133
Wolf-PSORT
Lj1g3v4717450.1	nucl 7, plas 2.5, chlo 2, golg_plas 2, mito 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4717450.1