Miyakogusa Predicted Gene
- Lj1g3v4701850.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MZ73_SOYBN |
175 |
74.5 |
78.3 |
(tr|K7MZ73) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G36380.1 |
164 |
68.9 |
76.4 |
| Symbols: PDR6, ATPDR6 | pleiotropic drug resistance 6 | chr2:15257583-15263627 FORWARD LENGTH=1453 |
| Medicago |
Medtr7g104110.1 |
174 |
72.6 |
80.2 |
| drug resistance transporter-like ABC domain protein | HC | chr7:42147066-42139607 | 20130731 |
| Soybean |
Glyma19g37760.1 |
175 |
74.5 |
78.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4701850.1 |
length: 106 aa. |
| IPR003959 |
ATPase, AAA-type, core |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005524 |
ATP binding |
|
|
| HMMPfam |
PF00004 |
AAA |
0.00017 |
3-26 |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| superfamily |
SSF52540 |
P-loop |
4e-13 |
1-89 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
1.8e-12 |
2-87 |
| HMMPanther |
PTHR19241 |
ATP-BINDING |
1.8e-37 |
1-106 |
| HMMPanther |
PTHR19241:SF77 |
ABC |
1.8e-37 |
1-106 |
| Seg |
seg |
seg |
NA |
9-23 |
- Wolf-PSORT
Lj1g3v4701850.1 cyto 5.5, cyto_E.R. 3.5, nucl 2, cysk 2, cysk_nucl 2, mito 1, plas 1, extr 1, golg 1, golg_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4701850.1 |
|