Miyakogusa Predicted Gene
- Lj1g3v4701810.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K3XDS9_SETIT |
130 |
76.5 |
81.5 |
(tr|K3XDS9) Uncharacterized protein OS=Setaria italica GN=Si000046m.g PE=4 SV=1 |
| TAIR_pep |
AT1G15520.1 |
122 |
70.4 |
77.8 |
| Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423 |
| Medicago |
Medtr7g104110.1 |
128 |
74.1 |
81.5 |
| drug resistance transporter-like ABC domain protein | HC | chr7:42147066-42139607 | 20130731 |
| Soybean |
Glyma19g37760.1 |
128 |
74.1 |
80.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4701810.1 |
length: 81 aa. |
| IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF52540 |
P-loop |
3.8e-08 |
1-70 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.300 |
no description |
3.5e-10 |
1-71 |
| HMMPanther |
PTHR19241 |
ATP-BINDING |
1e-60 |
1-81 |
| HMMPanther |
PTHR19241:SF10 |
ATP-BINDING |
1e-60 |
1-81 |
| Seg |
seg |
seg |
NA |
21-33 |
- Wolf-PSORT
Lj1g3v4701810.1 nucl 6, chlo 3, nucl_plas 3, extr 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4701810.1 |
|