Miyakogusa Predicted Gene

Lj1g3v4699690.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr1

Full length sequence(62285374 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JPY2_SOYBN 470 53.9 63.0 (tr|I1JPY2) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G03670.1 221 32.5 45.0 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). | chr5:947311-949898 FORWARD LENGTH=516

Medicago Medtr1g060890.1 319 42.1 53.6 | hypothetical protein | HC | chr1:26523784-26528833 | 20130731

Soybean Glyma03g34990.1 470 53.9 63.0

LJGI gnl|LJGI|BP081179 61.9 88.1 88.1 similar to UniRef100_A7PPI3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj1g3v4699690.1 length: 518 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 165-186
368-389

Seg seg seg NA 118-129
201-220
254-259
287-300
313-337
369-390

Wolf-PSORT

Lj1g3v4699690.1 nucl 14

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj1g3v4699690.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JPY2_SOYBN	470	53.9	63.0	(tr\|I1JPY2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G03670.1	221	32.5	45.0	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G36420.1); Has 700 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 18; Metazoa - 333; Fungi - 60; Plants - 73; Viruses - 24; Other Eukaryotes - 192 (source: NCBI BLink). \| chr5:947311-949898 FORWARD LENGTH=516
Medicago	Medtr1g060890.1	319	42.1	53.6	\| hypothetical protein \| HC \| chr1:26523784-26528833 \| 20130731
Soybean	Glyma03g34990.1	470	53.9	63.0
LJGI	gnl\|LJGI\|BP081179	61.9	88.1	88.1	similar to UniRef100_A7PPI3 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)

no_ID
Lj1g3v4699690.1				length: 518 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	165-186 368-389
Seg	seg	seg	NA	118-129 201-220 254-259 287-300 313-337 369-390