Miyakogusa Predicted Gene

Lj1g3v4695520.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KFY4_SOYBN 1433 56.3 65.2 (tr|K7KFY4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G36490.1 394 50.9 62.2 | Symbols: DML1, ROS1 | demeter-like 1 | chr2:15308259-15314272 REVERSE LENGTH=1393
Medicago Medtr7g103680.1 1240 51.2 60.4 | HhH-GPD base excision DNA repair family protein | HC | chr7:41975017-41984483 | 20130731
Soybean Glyma03g34860.1 1057 55.5 63.0  
LJGI gnl|LJGI|TC69060 722 99.5 99.5 similar to UniRef100_A7PPJ7 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4695520.3 length: 1442 aa.
IPR003265 HhH-GPD domain
method AccNumber shortName E-value location
Biological Process GO:0006284 base-excision repair    
HMMPfam PF00730 HhH-GPD 2.5e-14 1058-1182
HMMSmart SM00478 endonuclease 3.6e-05 1044-1216
IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif
Molecular Function GO:0004519 endonuclease activity    
Molecular Function GO:0051539 4 iron, 4 sulfur cluster binding    
HMMSmart SM00525 no description 0.0014 1243-1263
IPR011257 DNA glycosylase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0006281 DNA repair    
Gene3D G3DSA:1.10.340.30 no description 2.8e-09 1053-1135
superfamily SSF48150 DNA-glycosylase 6.8e-37 642-1269
IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal
Gene3D G3DSA:1.10.1670.10 no description 2.6e-14 1136-1215
no_ID  
Coil coil coiled-coil NA 1372-1393
HMMPanther PTHR10359 A/G-SPECIFIC 1.1e-170 607-1423
HMMPanther PTHR10359:SF3 ENDONUCLEASE 1.1e-170 607-1423
Seg seg seg NA 126-139
142-158
498-507
631-640
1165-1182
1261-1274
1336-1347
Wolf-PSORT
Lj1g3v4695520.3	nucl 12, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4695520.3