Miyakogusa Predicted Gene

Lj1g3v4693000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LZD7_SOYBN 232 65.4 77.1 (tr|I1LZD7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G03790.1 150 65.3 76.3 | Symbols: ATHB51, LMI1, HB51 | homeobox 51 | chr5:1004985-1006373 FORWARD LENGTH=235
Medicago Medtr7g103340.1 210 60.1 68.8 | homeobox leucine zipper protein | HC | chr7:41796359-41794419 | 20130731
Soybean Glyma13g21330.1 232 65.4 77.1  
LJGI gnl|LJGI|FS360041 168 83.0 83.0 similar to UniRef100_A7PPN2 Cluster: Chromosome chr8 scaffold_23, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_23, whole genome shotgun sequence - Vitis vinifera (Grape), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4693000.1 length: 182 aa.
IPR000047 Helix-turn-helix motif
method AccNumber shortName E-value location
Molecular Function GO:0000976 transcription regulatory region sequence-specific DNA binding    
FPrintScan PR00031 HTHREPRESSR 2.5e-05 55-64
64-80
IPR001356 Homeodomain
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1.4e-16 27-82
HMMSmart SM00389 Homeodomain 5.2e-17 27-88
ProfileScan PS50071 HOMEOBOX_2 18.269 24-84
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 9e-20 30-91
superfamily SSF46689 Homeodomain-like 1.5e-18 24-99
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 59-82
no_ID  
Coil coil coiled-coil NA 90-111
HMMPanther PTHR24326 FAMILY 2.1e-47 14-140
HMMPanther PTHR24326:SF76 SUBFAMILY 2.1e-47 14-140
Wolf-PSORT
Lj1g3v4693000.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4693000.1