Miyakogusa Predicted Gene

Lj1g3v4690470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K6S6_SOYBN 1103 93.2 95.6 (tr|I1K6S6) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT5G50920.1 1054 88.8 93.8 | Symbols: CLPC, ATHSP93-V, HSP93-V, DCA1, CLPC1 | CLPC homologue 1 | chr5:20715710-20719800 REVERSE LENGTH=929
Medicago Medtr3g102830.1 1093 92.2 94.9 | ATP-dependent Clp protease ATP-binding subunit | HC | chr3:47377876-47383774 | 20130731
Soybean Glyma05g38510.1 1103 93.2 95.6  
LJGI gnl|LJGI|TC68946 2694 97.1 97.1 homologue to UniRef100_P35100 Cluster: ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor; n=1; Pisum sativum|Rep: ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplast precursor - Pisum sativum (Garden pea), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v4690470.1 length: 589 aa.
IPR001270 Chaperonin ClpA/B
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
FPrintScan PR00300 CLPPROTEASEA 3.4e-41 304-322
349-367
378-396
411-425
PatternScan PS00871 CLPAB_2 NA 334-352
IPR001943 UVR domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF02151 UVR 4e-09 174-209
ProfileScan PS50151 UVR 11.605 174-209
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 9.6e-09 300-481
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.6e-06 8-78
IPR013093 ATPase, AAA-2
Molecular Function GO:0005524 ATP binding    
HMMPfam PF07724 AAA_2 1.3e-55 299-473
IPR018368 Chaperonin ClpA/B, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00870 CLPAB_1 NA 52-64
IPR019489 Clp ATPase, C-terminal
HMMPfam PF10431 ClpB_D2-small 1.9e-23 480-560
HMMSmart SM01086 C-terminal, 6.5e-31 480-570
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.8e-49 249-572
4-248
no_ID  
Coil coil coiled-coil NA 11-32
170-191
Gene3D G3DSA:1.10.8.60 no description 3.4e-28 101-185
491-573
Gene3D G3DSA:3.40.50.300 no description 3.7e-56 4-100
254-490
HMMPanther PTHR11638 ATP-DEPENDENT 0 1-584
Seg seg seg NA 42-54
Wolf-PSORT
Lj1g3v4690470.1	cyto 8, chlo 3, cysk 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v4690470.1